Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC034205.1-201ENST00000520621 638 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC022968.1-201ENST00000567372 442 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC012417.1-201ENST00000582307 1039 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 OR1AB1P-201ENST00000585564 761 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC010200.2-201ENST00000605098 235 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 AC000123.2-201ENST00000623124 461 ntBASIC4.09□□□□□ -1.75
TREX1Q9NSU2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.09□□□□□ -1.75
TREX1Q9NSU2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.09□□□□□ -1.76
TREX1Q9NSU2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TREX1Q9NSU2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TREX1Q9NSU2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TREX1Q9NSU2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RN7SKP44-201ENST00000363602 316 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RN7SKP33-201ENST00000410942 340 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RNA5SP39-201ENST00000411245 120 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 FAR2P2-201ENST00000413041 594 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 JKAMPP1-201ENST00000413804 919 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AL590806.1-201ENST00000415818 853 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 OR6K4P-201ENST00000423179 955 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 CHIAP3-201ENST00000423668 1133 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC069285.2-201ENST00000440210 275 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 METTL15P1-201ENST00000481421 1045 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RPS23P1-201ENST00000491662 432 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RN7SL604P-201ENST00000492589 296 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 RPL29P14-201ENST00000495837 428 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC018797.3-201ENST00000513388 1241 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AP003730.1-201ENST00000524605 285 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC053481.2-202ENST00000582394 1500 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AL445567.2-201ENST00000618935 498 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC233309.1-201ENST00000619522 751 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 AC015722.2-201ENST00000622210 551 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 MIR7641-1-201ENST00000627518 61 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.08□□□□□ -1.76
TREX1Q9NSU2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TREX1Q9NSU2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC087190.4-201ENST00000574616 8334 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 MTND4P26-201ENST00000415971 1359 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 RNU6-304P-201ENST00000364855 107 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 RPS27AP11-201ENST00000402798 447 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC004552.1-201ENST00000419089 348 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC073464.3-201ENST00000422564 712 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC073069.1-201ENST00000428657 441 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 NANOGP6-201ENST00000429190 847 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AL645939.1-201ENST00000453429 797 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AL121877.1-201ENST00000453704 622 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC069277.2-201ENST00000454211 432 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 RPS26P3-201ENST00000470205 348 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC090543.2-201ENST00000483963 348 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC004057.1-201ENST00000485827 348 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 RN7SL271P-201ENST00000487601 295 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 VWA8P1-201ENST00000510889 176 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 SNORD116-26-201ENST00000516006 96 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 C1GALT1P3-201ENST00000522049 819 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms