Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC092045.1-201ENST00000495716 1231 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.54□□□□□ -1.68
TPM1P09493 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.54□□□□□ -1.68
TPM1P09493 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.54□□□□□ -1.68
TPM1P09493 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 GNRHR2P1-201ENST00000555315 631 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM1P09493 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM1P09493 AC115286.1-201ENST00000604298 434 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AC007423.1-201ENST00000605009 627 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 AC012409.3-201ENST00000611343 981 ntBASIC4.54□□□□□ -1.68
TPM1P09493 RMST_5.1-201ENST00000618704 126 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AL445528.2-201ENST00000620582 470 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AC095038.2-201ENST00000621464 1070 ntBASIC4.54□□□□□ -1.68
TPM1P09493 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM1P09493 AC009950.2-201ENST00000636548 183 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AL773545.4-201ENST00000637262 310 ntBASIC4.54□□□□□ -1.68
TPM1P09493 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TPM1P09493 AL513478.4-201ENST00000641636 310 ntBASIC4.54□□□□□ -1.68
TPM1P09493 RAD17P1-201ENST00000418130 2042 ntBASIC4.54□□□□□ -1.68
TPM1P09493 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM1P09493 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM1P09493 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM1P09493 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM1P09493 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TPM1P09493 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 RN7SKP44-201ENST00000363602 316 ntBASIC4.53□□□□□ -1.68
TPM1P09493 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM1P09493 RNA5SP87-201ENST00000384155 118 ntBASIC4.53□□□□□ -1.68
TPM1P09493 MIR1178-201ENST00000408396 91 ntBASIC4.53□□□□□ -1.68
TPM1P09493 AL157831.1-201ENST00000426134 473 ntBASIC4.53□□□□□ -1.68
TPM1P09493 VDAC1P6-201ENST00000430062 855 ntBASIC4.53□□□□□ -1.68
TPM1P09493 MTCO1P54-201ENST00000430139 712 ntBASIC4.53□□□□□ -1.68
TPM1P09493 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM1P09493 RPL23AP52-201ENST00000439311 478 ntBASIC4.53□□□□□ -1.68
TPM1P09493 RPS20P4-201ENST00000461659 355 ntBASIC4.53□□□□□ -1.68
TPM1P09493 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 EIF4EP5-201ENST00000528228 640 ntBASIC4.53□□□□□ -1.68
TPM1P09493 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM1P09493 MIR4512-201ENST00000583257 77 ntBASIC4.53□□□□□ -1.68
TPM1P09493 AC244505.7-201ENST00000599675 272 ntBASIC4.53□□□□□ -1.68
TPM1P09493 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM1P09493 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM1P09493 SDR42E1P1-201ENST00000611327 477 ntBASIC4.53□□□□□ -1.68
TPM1P09493 AC002044.3-201ENST00000623314 541 ntBASIC4.53□□□□□ -1.68
TPM1P09493 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM1P09493 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM1P09493 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM1P09493 AC017002.4-201ENST00000604721 1525 ntBASIC4.52□□□□□ -1.69
TPM1P09493 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
TPM1P09493 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 AL590806.1-201ENST00000415818 853 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
TPM1P09493 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 RPL36AP15-201ENST00000444514 266 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 AL645939.1-201ENST00000453429 797 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AC005229.2-201ENST00000456995 399 ntBASIC4.52□□□□□ -1.69
TPM1P09493 RN7SL271P-201ENST00000487601 295 ntBASIC4.52□□□□□ -1.69
TPM1P09493 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 BTF3L4P4-201ENST00000506381 449 ntBASIC4.52□□□□□ -1.69
TPM1P09493 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TPM1P09493 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.52□□□□□ -1.69
TPM1P09493 IGLVIV-65-201ENST00000517313 360 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.52□□□□□ -1.69
TPM1P09493 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM1P09493 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.52□□□□□ -1.69
TPM1P09493 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.52□□□□□ -1.69
TPM1P09493 AGGF1P8-201ENST00000562979 1000 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM1P09493 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM1P09493 ABI1P1-201ENST00000603375 1120 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AL451044.1-201ENST00000604867 238 ntBASIC4.52□□□□□ -1.69
TPM1P09493 AL096803.3-201ENST00000609032 532 ntBASIC4.52□□□□□ -1.69
TPM1P09493 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms