Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RPL7P11-201ENST00000437586 658 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 UBE2V1P3-201ENST00000439651 417 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC073850.1-201ENST00000449243 255 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC010733.1-201ENST00000451515 401 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AL645939.1-201ENST00000453429 797 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 snoU13.20-201ENST00000459180 104 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 RPL7AP6-201ENST00000477943 801 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 RPL36AP41-201ENST00000493820 306 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC005798.1-201ENST00000513715 387 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 IGHV3-32-201ENST00000519182 355 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 HIGD1AP18-201ENST00000520730 278 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC006116.3-201ENST00000592968 361 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC087763.1-201ENST00000603391 286 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC010680.3-201ENST00000604215 520 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AL049844.2-201ENST00000604280 628 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC135803.1-201ENST00000608748 565 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 MIR6719-201ENST00000622428 87 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AP002799.1-201ENST00000623552 423 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 AC116563.2-201ENST00000624751 535 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 MFSD8-220ENST00000641243 1422 ntBASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RBFOX3A6NFN3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 NOL8P1-201ENST00000508336 3529 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC108467.2-201ENST00000617640 1597 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 OR11H4-201ENST00000315409 1082 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 RNA5SP305-201ENST00000362665 119 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 U8.4-201ENST00000363626 134 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 CHMP1B2P-201ENST00000399581 597 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 RN7SKP273-201ENST00000411392 314 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC140479.3-201ENST00000418944 1126 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 SAGE2P-201ENST00000420011 2126 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 PTMAP6-201ENST00000439110 327 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AL772161.1-201ENST00000439130 476 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC006511.1-201ENST00000470614 315 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC004453.1-201ENST00000487895 408 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 RPL32P9-201ENST00000487963 407 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC008953.1-201ENST00000497334 318 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC023050.1-201ENST00000498198 304 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 RNU6-1004P-201ENST00000516584 111 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 RN7SKP147-201ENST00000517154 244 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 IGKV2-38-201ENST00000517443 247 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC008676.3-201ENST00000521237 435 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC063949.1-201ENST00000552900 865 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AL161713.1-201ENST00000555538 145 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AL391597.1-201ENST00000618707 694 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC018445.2-201ENST00000622987 260 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 OR2L1P-202ENST00000641567 1023 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms