Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RNU1-94P-201ENST00000362627 173 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 MIR620-201ENST00000385232 95 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AL356968.2-201ENST00000412769 1257 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RPL6P29-201ENST00000414863 865 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AL121882.1-201ENST00000422893 417 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RPL23AP38-201ENST00000423801 469 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 VDAC1P6-201ENST00000430062 855 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RAB28P3-201ENST00000448325 597 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AP002345.1-201ENST00000456493 928 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC090543.1-201ENST00000492168 485 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RPS26P24-201ENST00000497656 331 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC010468.3-201ENST00000508225 458 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 MTCO1P35-201ENST00000515270 228 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RNU6-319P-201ENST00000516025 108 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RNA5SP519-201ENST00000516480 119 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 BNIP3P5-201ENST00000562290 498 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC015911.5-201ENST00000587076 451 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AL355816.2-201ENST00000610049 647 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AL163051.2-201ENST00000618976 735 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC090772.4-201ENST00000623599 362 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 RNA5SP196-201ENST00000625967 102 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 AC008013.2-202ENST00000637965 364 ntBASIC5.2□□□□□ -1.58
PDS5AQ29RF7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDS5AQ29RF7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 PROS2P-201ENST00000474651 1951 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 SNORA63.3-201ENST00000362682 132 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 RNU1-20P-201ENST00000363314 162 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 RNA5SP479-201ENST00000364858 117 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 GCNT6-201ENST00000379591 934 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AL035405.1-201ENST00000400795 710 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 OR8G2P-201ENST00000412796 908 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC007000.2-201ENST00000442564 487 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 RNF2P1-201ENST00000442955 1010 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC105918.1-201ENST00000474399 838 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC093663.2-201ENST00000484625 313 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC104164.2-201ENST00000496953 495 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 KCTD9P2-201ENST00000512203 1013 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC010374.2-201ENST00000512933 535 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 RNU6-1102P-201ENST00000516149 96 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 VTA1P2-201ENST00000520205 911 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC006064.5-201ENST00000541782 248 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC092868.3-201ENST00000560515 784 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 SS18L2P2-201ENST00000583960 235 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC006116.7-201ENST00000590141 756 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC067959.1-201ENST00000604334 379 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC017076.1-201ENST00000607613 578 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AC097460.3-201ENST00000623099 442 ntBASIC5.19□□□□□ -1.58
PDS5AQ29RF7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.19□□□□□ -1.58
PDS5AQ29RF7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms