Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC009318.3-201ENST00000616916 503 ntBASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 AL359757.1-201ENST00000623176 255 ntBASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 AL137100.1-201ENST00000556703 1620 ntBASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA2E9PIF3 AC108467.2-201ENST00000617640 1597 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL049555.1-201ENST00000562834 1933 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 U3.22-201ENST00000391120 215 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 RNA5SP397-201ENST00000391323 118 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 FABP12P1-201ENST00000401911 322 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 UQCRBP1-201ENST00000421129 336 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 RPS27AP7-201ENST00000422792 455 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL031663.1-201ENST00000437445 219 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL162591.2-201ENST00000449634 317 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 MTND2P6-201ENST00000455337 1030 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL591473.1-201ENST00000464297 313 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 RPS23P7-201ENST00000466210 444 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC025459.1-201ENST00000504072 156 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 PRELID3BP5-201ENST00000508612 460 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC134698.5-201ENST00000519444 336 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL109741.3-201ENST00000561748 592 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 MIR4716-201ENST00000579628 84 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC015849.2-201ENST00000605738 409 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC015804.1-201ENST00000622935 435 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC073592.7-201ENST00000623659 507 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC020923.1-201ENST00000624021 917 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC116563.2-201ENST00000624751 535 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AL049536.1-201ENST00000625043 744 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 AC012020.1-201ENST00000624541 1728 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 ZFRP1-201ENST00000457579 2970 ntBASIC4.23□□□□□ -1.73
NPIPA2E9PIF3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 RNA5SP447-201ENST00000363749 119 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 MIR129-1-201ENST00000384972 72 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 Z98745.1-201ENST00000402553 494 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AP000580.1-201ENST00000404439 358 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AL080315.1-201ENST00000406055 466 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC010385.1-201ENST00000412374 256 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 MTND4P11-201ENST00000417020 1058 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 ARL2BPP3-201ENST00000421226 480 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 RPL36AP10-201ENST00000421785 322 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 RPEP3-201ENST00000425462 676 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 RWDD4P2-201ENST00000426392 563 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 MTATP6P11-201ENST00000428071 670 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 PPIAP13-201ENST00000434706 478 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC073143.1-201ENST00000436316 395 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 CBX1P4-201ENST00000439415 457 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AL513321.1-201ENST00000441175 761 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC007000.2-201ENST00000442564 487 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 CYCSP34-201ENST00000458172 304 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC090142.1-201ENST00000465776 462 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 RWDD4P1-201ENST00000488019 565 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC026979.1-201ENST00000492525 396 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
NPIPA2E9PIF3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms