Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 MTCO1P52-201ENST00000433928 531 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 SLC31A1P1-201ENST00000451221 567 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 MTND6P6-201ENST00000478031 263 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 NPM1P17-201ENST00000479221 602 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC108860.1-201ENST00000484521 383 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC006499.3-201ENST00000506077 748 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 IGKV2D-19-201ENST00000523346 262 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 NPM1P35-201ENST00000533043 868 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 MIR4685-201ENST00000578185 69 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 RN7SL311P-201ENST00000579858 306 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC012417.1-201ENST00000582307 1039 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC008507.1-201ENST00000587506 734 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC095055.1-201ENST00000603472 1113 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC010245.2-201ENST00000606908 1167 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC100827.5-201ENST00000615883 426 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC016957.2-201ENST00000616998 848 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC007546.1-201ENST00000619452 559 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC105105.5-201ENST00000622635 1294 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AP002799.1-201ENST00000623552 423 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AL049536.1-201ENST00000625043 744 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 CDRT1-208ENST00000630868 794 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 ATE1-AS1-202ENST00000636460 506 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 ZNF137P-201ENST00000456718 1920 ntBASIC2.44□□□□□ -2.02
LINC00643Q86TS7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00643Q86TS7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AL592494.2-201ENST00000425455 1548 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC063923.1-201ENST00000478982 1619 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 MIR148B-201ENST00000362252 99 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 SNORA17.1-201ENST00000362945 126 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 CXADRP1-201ENST00000398098 1095 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 GSTA12P-201ENST00000402398 508 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 RN7SKP123-201ENST00000410732 291 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 GLRXP1-201ENST00000423261 334 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 FAR2P4-202ENST00000425399 584 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 DPPA2P1-201ENST00000428060 556 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC007563.3-201ENST00000433233 371 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AL353705.1-201ENST00000433468 480 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 MTND2P2-201ENST00000434633 945 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AL138899.2-201ENST00000439139 499 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AL138878.2-201ENST00000440581 1241 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 RPS27P5-201ENST00000444247 244 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 U3.44-201ENST00000458938 192 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC073648.3-201ENST00000504939 925 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 POU5F1P7-201ENST00000508759 541 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC007016.1-201ENST00000512110 244 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 OR5H7P-201ENST00000514084 930 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 SNORA64.4-201ENST00000516632 81 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 RNU7-143P-201ENST00000516781 65 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 IGKV1D-32-201ENST00000517449 318 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 OR5BC1P-201ENST00000529327 739 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC009643.1-201ENST00000532030 391 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AP000619.3-201ENST00000535634 1127 ntBASIC2.43□□□□□ -2.02
LINC00643Q86TS7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00643Q86TS7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms