Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC131971.1-201ENST00000332881 1482 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 OR10J6P-201ENST00000289731 930 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RNA5SP123-201ENST00000363244 119 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 LRRC37BP1-201ENST00000398851 714 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ATF1P1-201ENST00000406040 927 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RNU2-65P-201ENST00000410162 185 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 CTSL3P-202ENST00000412179 788 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ETF1P3-201ENST00000430422 1160 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RHOT1P3-201ENST00000436571 331 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC006994.1-201ENST00000438212 839 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC105402.2-201ENST00000438503 358 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 HMGN1P5-201ENST00000448591 263 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 TRY2P-201ENST00000448860 689 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RPL32P9-201ENST00000487963 407 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ENPP7P9-201ENST00000514456 627 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RNU2-30P-201ENST00000516209 141 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 LSM3P2-201ENST00000551246 273 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 EDDM3DP-201ENST00000554692 434 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AL021707.7-201ENST00000607991 416 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC133644.2-201ENST00000608142 540 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 OR2BH1P-201ENST00000608850 864 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC005156.1-201ENST00000613371 573 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 VN1R9P-201ENST00000614184 867 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AL049794.2-201ENST00000616301 365 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC015914.2-201ENST00000618167 288 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AL049777.1-201ENST00000622740 518 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC016717.3-201ENST00000624730 554 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AL353662.3-201ENST00000625131 237 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 MAPK10-263ENST00000641052 4307 ntBASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 AC107068.1-201ENST00000563286 4218 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 MTCO1P18-201ENST00000455518 1419 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC017007.4-201ENST00000503353 1352 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RN7SKP95-201ENST00000362860 303 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RNU6-354P-201ENST00000383862 107 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RNU6-610P-201ENST00000384264 107 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC013442.1-201ENST00000397347 228 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AL355143.1-201ENST00000407101 841 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC069282.1-201ENST00000411911 526 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AL445183.3-201ENST00000414168 502 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 CHEK2P3-201ENST00000416118 248 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AF186996.5-201ENST00000418098 904 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 snoU13.20-201ENST00000459180 104 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC096992.1-201ENST00000459808 709 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RPS17P2-201ENST00000461663 408 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RN7SL610P-201ENST00000463845 291 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms