Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 RN7SL290P-201ENST00000578661 300 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC022022.2-201ENST00000602989 360 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC020910.2-201ENST00000603635 610 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC006338.2-201ENST00000616864 791 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC109809.1-201ENST00000619665 545 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC090897.3-201ENST00000636973 1157 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 BX649567.1-201ENST00000642071 1134 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 ECM1P2-201ENST00000503354 1577 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC006042.3-201ENST00000454684 1469 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 OR1L6-202ENST00000373684 1044 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RNU6-906P-201ENST00000384700 70 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 U3.22-201ENST00000391120 215 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RN7SKP106-201ENST00000410832 272 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC114755.2-201ENST00000413520 361 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 BTF3P8-201ENST00000414577 526 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 HIGD1AP15-201ENST00000416198 280 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 TAF13P2-201ENST00000416876 286 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL449283.1-202ENST00000418249 604 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 GTF2IP2-201ENST00000424290 697 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RPL12P18-201ENST00000437175 325 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 MTCYBP42-201ENST00000444653 1130 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 ZNF886P-201ENST00000450781 723 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC091959.2-201ENST00000477363 321 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL161747.1-201ENST00000480068 358 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC097486.1-201ENST00000515331 210 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 BNIP3P4-201ENST00000604946 565 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL365400.2-201ENST00000605604 902 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RNA5SP439-201ENST00000617595 124 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AC092608.3-201ENST00000625017 386 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 AL121594.5-201ENST00000631724 573 ntBASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.03□□□□□ -1.44
RTFDC1Q9BY42 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 SEPT7P7-201ENST00000420492 1301 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 AL590240.1-201ENST00000334118 313 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 RNA5SP453-201ENST00000362503 119 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 SNORD113.2-201ENST00000364166 89 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 SNORA51.12-201ENST00000384448 134 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 SNORA70.10-201ENST00000384515 134 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 U3.30-201ENST00000391308 210 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 SNORA11C-201ENST00000408532 129 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 MIR1303-201ENST00000408625 86 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 COX6CP13-201ENST00000428703 226 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 AL450023.3-201ENST00000440592 271 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 TXNP5-201ENST00000441043 315 ntBASIC6.02□□□□□ -1.45
RTFDC1Q9BY42 OR10R1P-201ENST00000441524 1141 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms