Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC023509.5-201ENST00000617434 807 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC068870.2-201ENST00000620635 389 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AL359715.5-201ENST00000623431 443 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.35□□□□□ -1.71
LSM1O15116 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 LINC00622-201ENST00000562811 1570 ntBASIC4.35□□□□□ -1.71
LSM1O15116 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.35□□□□□ -1.71
LSM1O15116 AC007529.1-201ENST00000418574 2178 ntBASIC4.34□□□□□ -1.71
LSM1O15116 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LSM1O15116 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 CPHL1P-201ENST00000461341 3407 ntBASIC4.34□□□□□ -1.71
LSM1O15116 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 AC021146.4-201ENST00000309229 279 ntBASIC4.34□□□□□ -1.71
LSM1O15116 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LSM1O15116 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LSM1O15116 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LSM1O15116 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.34□□□□□ -1.71
LSM1O15116 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 PPIAP17-201ENST00000438507 471 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.34□□□□□ -1.71
LSM1O15116 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.34□□□□□ -1.71
LSM1O15116 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
LSM1O15116 VN1R48P-201ENST00000448149 1036 ntBASIC4.34□□□□□ -1.71
LSM1O15116 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AC092905.1-201ENST00000467527 949 ntBASIC4.34□□□□□ -1.71
LSM1O15116 MTND6P6-201ENST00000478031 263 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AC005912.1-201ENST00000495392 255 ntBASIC4.34□□□□□ -1.71
LSM1O15116 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AC034244.2-201ENST00000514668 858 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
LSM1O15116 IGKV2D-23-201ENST00000518179 286 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.34□□□□□ -1.71
LSM1O15116 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.34□□□□□ -1.71
LSM1O15116 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.34□□□□□ -1.71
LSM1O15116 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LSM1O15116 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.34□□□□□ -1.71
LSM1O15116 AC098935.2-201ENST00000604222 466 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.34□□□□□ -1.71
LSM1O15116 AC000123.2-201ENST00000623124 461 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AL355480.1-201ENST00000629041 99 ntBASIC4.34□□□□□ -1.71
LSM1O15116 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
LSM1O15116 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.34□□□□□ -1.71
LSM1O15116 AC027287.1-201ENST00000553115 1453 ntBASIC4.34□□□□□ -1.71
LSM1O15116 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.34□□□□□ -1.71
LSM1O15116 AC108467.2-201ENST00000617640 1597 ntBASIC4.34□□□□□ -1.71
LSM1O15116 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.34□□□□□ -1.71
LSM1O15116 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LSM1O15116 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.72
LSM1O15116 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
LSM1O15116 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.72
LSM1O15116 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LSM1O15116 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LSM1O15116 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LSM1O15116 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LSM1O15116 AL590240.1-201ENST00000334118 313 ntBASIC4.33□□□□□ -1.72
LSM1O15116 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LSM1O15116 SNORA71.2-201ENST00000364941 134 ntBASIC4.33□□□□□ -1.72
LSM1O15116 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LSM1O15116 MIR513A2-201ENST00000385249 127 ntBASIC4.33□□□□□ -1.72
LSM1O15116 UBTFL3-201ENST00000418934 1024 ntBASIC4.33□□□□□ -1.72
LSM1O15116 AC073464.3-201ENST00000422564 712 ntBASIC4.33□□□□□ -1.72
LSM1O15116 CENPIP1-201ENST00000425713 902 ntBASIC4.33□□□□□ -1.72
LSM1O15116 Z85994.2-201ENST00000434327 452 ntBASIC4.33□□□□□ -1.72
LSM1O15116 RPL7P33-201ENST00000444159 742 ntBASIC4.33□□□□□ -1.72
LSM1O15116 RPL31P44-201ENST00000447680 377 ntBASIC4.33□□□□□ -1.72
LSM1O15116 BUD31P2-201ENST00000449374 300 ntBASIC4.33□□□□□ -1.72
LSM1O15116 AC005229.2-201ENST00000456995 399 ntBASIC4.33□□□□□ -1.72
LSM1O15116 UBTFL6-201ENST00000477929 1024 ntBASIC4.33□□□□□ -1.72
LSM1O15116 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.33□□□□□ -1.72
LSM1O15116 AC147055.1-201ENST00000509261 750 ntBASIC4.33□□□□□ -1.72
LSM1O15116 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.33□□□□□ -1.72
LSM1O15116 PPBPP1-201ENST00000510807 373 ntBASIC4.33□□□□□ -1.72
LSM1O15116 SCARNA21.2-201ENST00000516600 166 ntBASIC4.33□□□□□ -1.72
LSM1O15116 IGLV3-26-201ENST00000520756 302 ntBASIC4.33□□□□□ -1.72
LSM1O15116 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.33□□□□□ -1.72
LSM1O15116 SMARCE1P4-201ENST00000523647 241 ntBASIC4.33□□□□□ -1.72
LSM1O15116 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.33□□□□□ -1.72
LSM1O15116 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.33□□□□□ -1.72
LSM1O15116 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.33□□□□□ -1.72
LSM1O15116 MIR4737-201ENST00000583979 81 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms