Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX4Q33E94 PSMD10P3-201ENST00000437000 448 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 AL162388.1-201ENST00000450912 352 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX4Q33E94 RPL31P53-201ENST00000457065 348 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC006517.1-201ENST00000480485 328 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.07□□□□□ -1.76
RFX4Q33E94 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC044860.2-201ENST00000561005 179 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX4Q33E94 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX4Q33E94 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC073091.2-201ENST00000603205 907 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 AC138907.10-201ENST00000623708 983 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX4Q33E94 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX4Q33E94 PHKBP1-201ENST00000450951 1951 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFX4Q33E94 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RFX4Q33E94 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.06□□□□□ -1.76
RFX4Q33E94 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 SDAD1P1-202ENST00000524156 2051 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.06□□□□□ -1.76
RFX4Q33E94 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AC010132.2-201ENST00000295493 1043 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC021146.4-201ENST00000309229 279 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AL109941.1-201ENST00000401925 229 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 OR1F12-201ENST00000402365 945 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX4Q33E94 MTND2P11-201ENST00000423638 648 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX4Q33E94 RPL12P46-201ENST00000436610 195 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 PTMAP6-201ENST00000439110 327 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 RAD1P2-201ENST00000446414 663 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.06□□□□□ -1.76
RFX4Q33E94 MTND4LP2-201ENST00000502312 285 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC008638.1-201ENST00000506035 866 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX4Q33E94 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX4Q33E94 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX4Q33E94 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AC027281.1-201ENST00000574178 758 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RFX4Q33E94 AL031320.1-201ENST00000604177 357 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC098935.2-201ENST00000604222 466 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC005084.1-201ENST00000605160 304 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC012603.1-201ENST00000606424 528 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AL592494.3-201ENST00000609485 464 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 MIR7155-201ENST00000615925 56 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC090510.2-201ENST00000617465 629 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
RFX4Q33E94 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.06□□□□□ -1.76
RFX4Q33E94 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RFX4Q33E94 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFX4Q33E94 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC092079.1-201ENST00000558620 1985 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AL392003.1-201ENST00000434394 243 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 RPL31P44-201ENST00000447680 377 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 RAB28P3-201ENST00000448325 597 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.05□□□□□ -1.76
RFX4Q33E94 RN7SL329P-201ENST00000467740 299 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 VTA1P2-201ENST00000520205 911 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC107016.1-201ENST00000550463 337 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC012213.4-201ENST00000606457 354 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms