Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.96□□□□□ -0.02
H2afb3S4R1G7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb3S4R1G7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb3S4R1G7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Gm7638-201ENSMUST00000121348 967 ntBASIC14.94□□□□□ -0.02
H2afb3S4R1G7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Gm38027-201ENSMUST00000192315 235 ntBASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb3S4R1G7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb3S4R1G7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms