Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Gm5643-201ENSMUST00000117081 966 ntBASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Gm12527-201ENSMUST00000117967 564 ntBASIC15.09■□□□□ 0.01
H2afb1S4R1E0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb1S4R1E0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
H2afb1S4R1E0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
H2afb1S4R1E0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
H2afb1S4R1E0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.08■□□□□ 0
H2afb1S4R1E0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
H2afb1S4R1E0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.08■□□□□ 0
H2afb1S4R1E0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.08■□□□□ 0
H2afb1S4R1E0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb1S4R1E0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
H2afb1S4R1E0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
H2afb1S4R1E0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.07■□□□□ 0
H2afb1S4R1E0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
H2afb1S4R1E0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.07■□□□□ 0
H2afb1S4R1E0 Gm17661-201ENSMUST00000170317 270 ntBASIC15.07■□□□□ 0
H2afb1S4R1E0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.07■□□□□ 0
H2afb1S4R1E0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.07■□□□□ 0
H2afb1S4R1E0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb1S4R1E0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
H2afb1S4R1E0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.06■□□□□ 0
H2afb1S4R1E0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.06■□□□□ 0
H2afb1S4R1E0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
H2afb1S4R1E0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.06■□□□□ 0
H2afb1S4R1E0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.06■□□□□ 0
H2afb1S4R1E0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb1S4R1E0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb1S4R1E0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb1S4R1E0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.05■□□□□ 0
H2afb1S4R1E0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb1S4R1E0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms