Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Gm15375-201ENSMUST00000119510 849 ntBASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crlf3Q9Z2L7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crlf3Q9Z2L7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Crlf3Q9Z2L7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Crlf3Q9Z2L7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Crlf3Q9Z2L7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crlf3Q9Z2L7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Crlf3Q9Z2L7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crlf3Q9Z2L7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms