Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Phf1Q9Z1B8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Gm27389-201ENSMUST00000183622 195 ntBASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Ank2-226ENSMUST00000189368 339 ntBASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phf1Q9Z1B8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phf1Q9Z1B8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Actl10-202ENSMUST00000226583 1501 ntBASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Gm25016-201ENSMUST00000158399 131 ntBASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Phf1Q9Z1B8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Phf1Q9Z1B8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.27■□□□□ 0.03
Phf1Q9Z1B8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Phf1Q9Z1B8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Phf1Q9Z1B8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Phf1Q9Z1B8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.27■□□□□ 0.03
Phf1Q9Z1B8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Gm5587-201ENSMUST00000206270 674 ntBASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phf1Q9Z1B8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms