Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm12895-201ENSMUST00000122214 226 ntBASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nr1h3Q9Z0Y9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h3Q9Z0Y9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h3Q9Z0Y9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h3Q9Z0Y9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h3Q9Z0Y9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h3Q9Z0Y9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h3Q9Z0Y9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h3Q9Z0Y9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Nr1h3Q9Z0Y9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Gm27459-201ENSMUST00000184860 107 ntBASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Gm43347-201ENSMUST00000200226 580 ntBASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h3Q9Z0Y9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Gm29707-201ENSMUST00000196325 491 ntBASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nr1h3Q9Z0Y9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms