Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Gm11745-201ENSMUST00000121669 448 ntBASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Gm17271-201ENSMUST00000165535 355 ntBASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Grk6-206ENSMUST00000224995 2971 ntBASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a4Q9QZR9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Mir7023-201ENSMUST00000185093 64 ntBASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a4Q9QZR9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a4Q9QZR9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm15427-201ENSMUST00000117288 531 ntBASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm12428-201ENSMUST00000119844 727 ntBASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm4899-201ENSMUST00000178708 719 ntBASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm45612-201ENSMUST00000211320 160 ntBASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.59■□□□□ 0.25
Col4a4Q9QZR9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a4Q9QZR9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a4Q9QZR9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a4Q9QZR9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a4Q9QZR9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Mir6404-201ENSMUST00000183699 94 ntBASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Gm45167-201ENSMUST00000208007 322 ntBASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Col4a4Q9QZR9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms