Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Shroom3Q9QXN0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Shroom3Q9QXN0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Shroom3Q9QXN0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.64■□□□□ 0.26
Shroom3Q9QXN0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom3Q9QXN0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Gm37722-201ENSMUST00000193757 208 ntBASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shroom3Q9QXN0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Gm11950-201ENSMUST00000121615 838 ntBASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom3Q9QXN0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms