Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1aQ9QWF0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1aQ9QWF0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1aQ9QWF0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chaf1aQ9QWF0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1aQ9QWF0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1aQ9QWF0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1aQ9QWF0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1aQ9QWF0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1aQ9QWF0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.57■□□□□ 0.56
Chaf1aQ9QWF0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
Chaf1aQ9QWF0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms