Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx5Q9JL61 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx5Q9JL61 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx5Q9JL61 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx5Q9JL61 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Gm15794-201ENSMUST00000120182 631 ntBASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx5Q9JL61 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Gm27704-201ENSMUST00000185094 107 ntBASIC17.52■□□□□ 0.4
Rfx5Q9JL61 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx5Q9JL61 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx5Q9JL61 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Gm7284-201ENSMUST00000131667 944 ntBASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Gm45328-201ENSMUST00000210942 917 ntBASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms