Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gm15590-201ENSMUST00000078419 552 ntBASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Gm14140-201ENSMUST00000119999 995 ntBASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Gm15467-201ENSMUST00000120582 445 ntBASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn5aQ9JJV9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Gm14494-201ENSMUST00000118786 435 ntBASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn5aQ9JJV9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn5aQ9JJV9 Gm8097-201ENSMUST00000117903 829 ntBASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms