Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox1Q9JJ43 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Gm18958-201ENSMUST00000174258 762 ntBASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox1Q9JJ43 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Timm23-208ENSMUST00000226683 750 ntBASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox1Q9JJ43 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms