Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup50Q9JIH2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Actl10-202ENSMUST00000226583 1501 ntBASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm22240-201ENSMUST00000175225 82 ntBASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm7370-201ENSMUST00000219471 767 ntBASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup50Q9JIH2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nup50Q9JIH2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Gm10812-201ENSMUST00000099864 546 ntBASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup50Q9JIH2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup50Q9JIH2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup50Q9JIH2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nup50Q9JIH2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup50Q9JIH2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup50Q9JIH2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms