Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3bQ9ES34 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3bQ9ES34 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Gm13312-201ENSMUST00000119631 718 ntBASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Gm17971-201ENSMUST00000190239 806 ntBASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3bQ9ES34 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Gm36967-201ENSMUST00000193814 266 ntBASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3bQ9ES34 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms