Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr9Q9EQU3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr9Q9EQU3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr9Q9EQU3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Tlr9Q9EQU3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr9Q9EQU3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms