Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps35Q9EQH3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps35Q9EQH3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps35Q9EQH3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms