Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rsph3bQ9DA80 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Gm44450-201ENSMUST00000199528 114 ntBASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Gm18421-201ENSMUST00000204122 625 ntBASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph3bQ9DA80 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Rsph3bQ9DA80 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rsph3bQ9DA80 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Gm29707-201ENSMUST00000196325 491 ntBASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.2■□□□□ 0.5
Rsph3bQ9DA80 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph3bQ9DA80 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph3bQ9DA80 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph3bQ9DA80 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms