Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp5Q9D7S9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chmp5Q9D7S9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.83■□□□□ 0.93
Chmp5Q9D7S9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp5Q9D7S9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp5Q9D7S9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp5Q9D7S9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp5Q9D7S9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp5Q9D7S9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp5Q9D7S9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp5Q9D7S9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp5Q9D7S9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp5Q9D7S9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp5Q9D7S9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp5Q9D7S9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp5Q9D7S9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms