Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap53Q9D439 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.23■□□□□ 0.51
Cfap53Q9D439 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.23■□□□□ 0.51
Cfap53Q9D439 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gm15565-201ENSMUST00000118890 427 ntBASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gm43799-201ENSMUST00000201845 579 ntBASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gm7370-201ENSMUST00000219471 767 ntBASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap53Q9D439 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.21■□□□□ 0.51
Cfap53Q9D439 Gm7889-201ENSMUST00000185591 958 ntBASIC18.21■□□□□ 0.51
Cfap53Q9D439 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap53Q9D439 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cfap53Q9D439 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.2■□□□□ 0.5
Cfap53Q9D439 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap53Q9D439 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Gm18959-201ENSMUST00000208954 655 ntBASIC18.19■□□□□ 0.5
Cfap53Q9D439 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms