Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Stag1Q9D3E6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Gm44430-201ENSMUST00000203376 995 ntBASIC19.76■□□□□ 0.75
Stag1Q9D3E6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Stag1Q9D3E6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Stag1Q9D3E6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Gm12644-201ENSMUST00000119935 606 ntBASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Stag1Q9D3E6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Gm11452-201ENSMUST00000122376 690 ntBASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.73■□□□□ 0.75
Stag1Q9D3E6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stag1Q9D3E6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stag1Q9D3E6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms