Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm27742-201ENSMUST00000184667 60 ntBASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.31■□□□□ 0.04
Rita1Q9D1H0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rita1Q9D1H0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Gm45328-201ENSMUST00000210942 917 ntBASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rita1Q9D1H0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rita1Q9D1H0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rita1Q9D1H0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rita1Q9D1H0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rita1Q9D1H0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rita1Q9D1H0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.27■□□□□ 0.03
Rita1Q9D1H0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rita1Q9D1H0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rita1Q9D1H0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rita1Q9D1H0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms