Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssbp3Q9D032 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Gm37722-201ENSMUST00000193757 208 ntBASIC13.84□□□□□ -0.19
Ssbp3Q9D032 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssbp3Q9D032 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ssbp3Q9D032 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssbp3Q9D032 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssbp3Q9D032 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms