Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Gm20760-201ENSMUST00000179197 648 ntBASIC19.57■□□□□ 0.72
Smc3Q9CW03 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.57■□□□□ 0.72
Smc3Q9CW03 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc3Q9CW03 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smc3Q9CW03 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.55■□□□□ 0.72
Smc3Q9CW03 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.55■□□□□ 0.72
Smc3Q9CW03 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc3Q9CW03 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smc3Q9CW03 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc3Q9CW03 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.53■□□□□ 0.72
Smc3Q9CW03 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Gm13168-201ENSMUST00000121771 632 ntBASIC19.53■□□□□ 0.72
Smc3Q9CW03 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Gm7791-201ENSMUST00000219066 539 ntBASIC19.53■□□□□ 0.72
Smc3Q9CW03 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc3Q9CW03 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms