Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Mrpl35Q9CQL6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mrpl35Q9CQL6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Mrpl35Q9CQL6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Mrpl35Q9CQL6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mrpl35Q9CQL6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mrpl35Q9CQL6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Gm27000-201ENSMUST00000182943 842 ntBASIC12.31□□□□□ -0.44
Mrpl35Q9CQL6 Gm7213-201ENSMUST00000215977 950 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms