Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chchd1Q9CQA6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chchd1Q9CQA6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Gm27801-201ENSMUST00000184174 223 ntBASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms