Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.26□□□□□ -0.13
Smim3Q99PE5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim3Q99PE5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.25□□□□□ -0.13
Smim3Q99PE5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim3Q99PE5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.24□□□□□ -0.13
Smim3Q99PE5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Gm12821-201ENSMUST00000120022 600 ntBASIC14.24□□□□□ -0.13
Smim3Q99PE5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim3Q99PE5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim3Q99PE5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Sybu-209ENSMUST00000228639 4113 ntBASIC14.22□□□□□ -0.13
Smim3Q99PE5 Prob1-201ENSMUST00000097619 3021 ntBASIC14.22□□□□□ -0.13
Smim3Q99PE5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms