Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird2Q99NI3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gtf2ird2Q99NI3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird2Q99NI3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird2Q99NI3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Gm29518-201ENSMUST00000190858 372 ntBASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Gm17808-201ENSMUST00000200859 894 ntBASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird2Q99NI3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird2Q99NI3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.08■□□□□ 0.33
Gtf2ird2Q99NI3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf2ird2Q99NI3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Gm6623-201ENSMUST00000173570 544 ntBASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf2ird2Q99NI3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Mir770-201ENSMUST00000103252 94 ntBASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms