Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Timm23-208ENSMUST00000226683 750 ntBASIC16.14■□□□□ 0.17
Rnf111Q99ML9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf111Q99ML9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf111Q99ML9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf111Q99ML9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf111Q99ML9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms