Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.55□□□□□ -0.08
Scrt1Q99M85 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scrt1Q99M85 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.54□□□□□ -0.08
Scrt1Q99M85 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Gm18206-201ENSMUST00000207027 926 ntBASIC14.54□□□□□ -0.08
Scrt1Q99M85 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scrt1Q99M85 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.53□□□□□ -0.08
Scrt1Q99M85 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scrt1Q99M85 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.52□□□□□ -0.08
Scrt1Q99M85 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scrt1Q99M85 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scrt1Q99M85 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms