Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.53■□□□□ 0.88
RtcbQ99LF4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.52■□□□□ 0.88
RtcbQ99LF4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RtcbQ99LF4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RtcbQ99LF4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RtcbQ99LF4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RtcbQ99LF4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RtcbQ99LF4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RtcbQ99LF4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Gm13036-201ENSMUST00000117799 748 ntBASIC20.51■□□□□ 0.87
RtcbQ99LF4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.51■□□□□ 0.87
RtcbQ99LF4 Gm14822-201ENSMUST00000122247 291 ntBASIC20.51■□□□□ 0.87
RtcbQ99LF4 Gm12497-201ENSMUST00000138778 237 ntBASIC20.51■□□□□ 0.87
RtcbQ99LF4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Gm27628-201ENSMUST00000184911 107 ntBASIC20.51■□□□□ 0.87
RtcbQ99LF4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RtcbQ99LF4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.5■□□□□ 0.87
RtcbQ99LF4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Gm8097-201ENSMUST00000117903 829 ntBASIC20.5■□□□□ 0.87
RtcbQ99LF4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RtcbQ99LF4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.49■□□□□ 0.87
RtcbQ99LF4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Gm4459-201ENSMUST00000118750 468 ntBASIC20.49■□□□□ 0.87
RtcbQ99LF4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.49■□□□□ 0.87
RtcbQ99LF4 Gm11780-201ENSMUST00000136880 516 ntBASIC20.49■□□□□ 0.87
RtcbQ99LF4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.49■□□□□ 0.87
RtcbQ99LF4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RtcbQ99LF4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.48■□□□□ 0.87
RtcbQ99LF4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.48■□□□□ 0.87
RtcbQ99LF4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.48■□□□□ 0.87
RtcbQ99LF4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RtcbQ99LF4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms