Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd3Q99LE3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Gm18421-201ENSMUST00000204122 625 ntBASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.26■□□□□ 0.35
Lysmd3Q99LE3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Gm45328-201ENSMUST00000210942 917 ntBASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd3Q99LE3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lysmd3Q99LE3 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Gm29707-201ENSMUST00000196325 491 ntBASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd3Q99LE3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd3Q99LE3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd3Q99LE3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd3Q99LE3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms