Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Smc1bQ920F6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc1bQ920F6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Actl10-202ENSMUST00000226583 1501 ntBASIC19.13■□□□□ 0.65
Smc1bQ920F6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.13■□□□□ 0.65
Smc1bQ920F6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc1bQ920F6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc1bQ920F6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.11■□□□□ 0.65
Smc1bQ920F6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Gm43347-201ENSMUST00000200226 580 ntBASIC19.11■□□□□ 0.65
Smc1bQ920F6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smc1bQ920F6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.1■□□□□ 0.65
Smc1bQ920F6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Gm18733-201ENSMUST00000173950 856 ntBASIC19.1■□□□□ 0.65
Smc1bQ920F6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Gm29791-202ENSMUST00000207888 369 ntBASIC19.1■□□□□ 0.65
Smc1bQ920F6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc1bQ920F6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms