Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb22Q91XZ8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Mir770-201ENSMUST00000103252 94 ntBASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb22Q91XZ8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb22Q91XZ8 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Haglr-201ENSMUST00000100000 2085 ntBASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb22Q91XZ8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb22Q91XZ8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb22Q91XZ8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb22Q91XZ8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms