Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Mir5122-201ENSMUST00000175004 89 ntBASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gm27000-201ENSMUST00000182943 842 ntBASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga11Q91XY8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga11Q91XY8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga11Q91XY8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Gm18958-201ENSMUST00000174258 762 ntBASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga11Q91XY8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms