Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.02■□□□□ 0.64
Trex1Q91XB0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Gm18733-201ENSMUST00000173950 856 ntBASIC19.02■□□□□ 0.64
Trex1Q91XB0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Gm18195-201ENSMUST00000207604 706 ntBASIC19.02■□□□□ 0.64
Trex1Q91XB0 Gm6296-201ENSMUST00000222599 943 ntBASIC19.02■□□□□ 0.64
Trex1Q91XB0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trex1Q91XB0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44357-201ENSMUST00000195897 142 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm19658-201ENSMUST00000196231 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44367-201ENSMUST00000196836 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44350-201ENSMUST00000197197 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44390-201ENSMUST00000197533 144 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44313-201ENSMUST00000198018 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44486-201ENSMUST00000198508 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44314-201ENSMUST00000199263 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44394-201ENSMUST00000199558 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44484-201ENSMUST00000199873 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44466-201ENSMUST00000200264 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Gm44359-201ENSMUST00000200671 138 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.01■□□□□ 0.63
Trex1Q91XB0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trex1Q91XB0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Rarb-207ENSMUST00000225921 2756 ntBASIC19■□□□□ 0.63
Trex1Q91XB0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19■□□□□ 0.63
Trex1Q91XB0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trex1Q91XB0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19■□□□□ 0.63
Trex1Q91XB0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19■□□□□ 0.63
Trex1Q91XB0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trex1Q91XB0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trex1Q91XB0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.99■□□□□ 0.63
Trex1Q91XB0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.99■□□□□ 0.63
Trex1Q91XB0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.98■□□□□ 0.63
Trex1Q91XB0 Gm6376-201ENSMUST00000209407 580 ntBASIC18.98■□□□□ 0.63
Trex1Q91XB0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms