Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Gm29707-201ENSMUST00000196325 491 ntBASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.27□□□□□ -0.13
Cspg4Q8VHY0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Gm15173-201ENSMUST00000122049 433 ntBASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cspg4Q8VHY0 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Gm11424-201ENSMUST00000121929 829 ntBASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg4Q8VHY0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg4Q8VHY0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms