Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg1dQ8VE91 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg1dQ8VE91 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg1dQ8VE91 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.5■□□□□ 0.23
Retreg1dQ8VE91 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retreg1dQ8VE91 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg1dQ8VE91 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Gm26039-201ENSMUST00000158152 144 ntBASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Retreg1dQ8VE91 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Gm14859-201ENSMUST00000117752 357 ntBASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Gm5587-201ENSMUST00000206270 674 ntBASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg1dQ8VE91 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Retreg1dQ8VE91 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg1dQ8VE91 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.46■□□□□ 0.22
Retreg1dQ8VE91 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg1dQ8VE91 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg1dQ8VE91 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms