Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Gm18115-201ENSMUST00000221209 621 ntBASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rprd1aQ8VDS4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rprd1aQ8VDS4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rprd1aQ8VDS4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rprd1aQ8VDS4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rprd1aQ8VDS4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rprd1aQ8VDS4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Rprd1aQ8VDS4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
Rprd1aQ8VDS4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rprd1aQ8VDS4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms