Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Rpap2Q8VC34 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gm10013-201ENSMUST00000106074 672 ntBASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gm29707-201ENSMUST00000196325 491 ntBASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpap2Q8VC34 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.25■□□□□ 0.51
Rpap2Q8VC34 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpap2Q8VC34 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Gm11355-201ENSMUST00000121120 306 ntBASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpap2Q8VC34 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rpap2Q8VC34 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Gm37722-201ENSMUST00000193757 208 ntBASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpap2Q8VC34 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms