Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Flg-201ENSMUST00000050758 1488 ntBASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slf1Q8R3P9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slf1Q8R3P9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slf1Q8R3P9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slf1Q8R3P9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slf1Q8R3P9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slf1Q8R3P9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slf1Q8R3P9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slf1Q8R3P9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Slf1Q8R3P9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms