Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vmn1r28Q8R2C9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vmn1r28Q8R2C9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Gm11336-201ENSMUST00000118168 334 ntBASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vmn1r28Q8R2C9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vmn1r28Q8R2C9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r28Q8R2C9 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.27■□□□□ 0.03
Vmn1r28Q8R2C9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r28Q8R2C9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r28Q8R2C9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vmn1r28Q8R2C9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r28Q8R2C9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms